File formats

DICOM — the universal format for CBCT and medical images

Every CBCT scanner produces DICOM. Understand its structure, typical pitfalls in exports, and how to open a DICOM study reliably across operating systems and devices.

What DICOM actually is

DICOM (Digital Imaging and Communications in Medicine) is a standard managed by NEMA. It specifies how medical images are stored on disk and how they are exchanged between machines — workstations, scanners, PACS servers, archives.

Every DICOM file has two parts: a header with metadata tags (patient demographics, study date, scanner model, acquisition parameters, slice position) and the pixel data itself. Tags are identified by a (group, element) pair like (0010, 0020) for Patient ID.

How a CBCT study is structured

A single CBCT acquisition typically exports hundreds of axial slices. Each slice is its own .dcm file, numbered in sequence. Together they make up one series. Several series together make a study. Folder layout is usually something like Patient / Study / Series / *.dcm.

Some scanners also export a DICOMDIR file — an index that lets viewers load the study without scanning every file. Others embed the study in a ZIP or produce proprietary containers (like PROJ files in NewTom) that need to be converted first.

Common export pitfalls

Anonymisation stripped the study UID — you can no longer match series to report. Always anonymise in a way that keeps series-level identifiers consistent.

Slice ordering is lost after zip compression on some systems. Viewers that rely on file name ordering instead of DICOM tags will show the volume in random order. Always use a viewer that reads tag (0020, 0032) Image Position Patient.

Burned-in annotations. Some scanners put text overlays on the images. Viewers cannot remove them — better to disable burn-in during export.

Transfer syntax. DICOM supports many pixel encodings. Some older viewers cannot decode JPEG 2000 lossless CBCT — the scan looks blank. Modern browser-based viewers handle most encodings natively.

Opening DICOM without installing anything

Desktop viewers still work fine, but they are OS-specific and require install. For quick review, sharing with a patient or second opinion between specialists, browser-based viewers are easier — drag the folder in, the viewer indexes the series and shows axial, coronal, sagittal and 3D reconstructions.

CBCTHub reads standard DICOM folders, compressed archives, DICOMDIR indexes, and the main proprietary containers (with conversion). Processing is local — the patient data never touches a server unless the user explicitly shares a link.

FAQ

Can I open a .dcm file with a normal image viewer?

Some accept single .dcm files as images, but they will not stack the slices into a 3D volume and will ignore metadata. You need a DICOM-aware viewer for diagnostic use.

Are DICOM files the same as .jpg or .png?

No. DICOM stores pixel data with clinical metadata (patient ID, slice geometry, scanner parameters). You can export a DICOM slice to JPG for a report, but the opposite — reconstructing a CBCT from JPG — is not possible.

How big is a typical CBCT DICOM study?

Between 100 MB and 1.5 GB depending on voxel size and FOV. Bigger voxel counts and uncompressed transfer syntaxes produce larger files.

Drop a DICOM folder here

No install, no conversion step. CBCTHub reads the folder, the ZIP or the DICOMDIR and opens the volume in a few seconds on any modern browser.

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